BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024G01LP1|AL428261
(1035 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig126 1224 0.0
>3x_Contig126
Length = 1112
Score = 1224 bits (617), Expect = 0.0
Identities = 620/621 (99%)
Strand = Plus / Minus
Query: 1 gatcatagttcttcatgtttctttcatggggtaacgtataatcaatttcaaattgtgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gatcatagttcttcatgtttctttcatggggtaacgtataatcaatttcaaattgtgatg 584
Query: 61 gggaacttggggagtccatcttttcggaataatcggacattgtcacgacaccatcagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gggaacttggggagtccatcttttcggaataatcggacattgtcacgacaccatcagatg 524
Query: 121 agctactgcaatagaattgggcgtaattgtcctgctgttgagggttgttaggtagaatct 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agctaccgcaatagaattgggcgtaattgtcctgctgttgagggttgttaggtagaatct 464
Query: 181 tttcagtgattttaccgacgcgcgtatccttgtgcttgattctccaatccgtaatagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tttcagtgattttaccgacgcgcgtatccttgtgcttgattctccaatccgtaatagaat 404
Query: 241 caatcactacaccaagtccgatggttctgaggaagtttgcatacatgtttaatgcatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 caatcactacaccaagtccgatggttctgaggaagtttgcatacatgtttaatgcatcag 344
Query: 301 atccaagtccgaatattaagaataccaggtaggacataactatgtacagccatacactgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atccaagtccgaatattaagaataccaggtaggacataactatgtacagccatacactgt 284
Query: 361 acaatggttgaccaggatcgaaatgtaatatcacgttccataaagcactattgtgcgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 acaatggttgaccaggatcgaaatgtaatatcacgttccataaagcactattgtgcgttt 224
Query: 421 ctttgaagctataatgacggtacgtggggctgacgttcttcaagtccgaaacgaatgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ctttgaagctataatgacggtacgtggggctgacgttcttcaagtccgaaacgaatgaat 164
Query: 481 acatagagaacggaaacatgatcaggatgataaccatacaaaagattagtaatctcgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 acatagagaacggaaacatgatcaggatgataaccatacaaaagattagtaatctcgaaa 104
Query: 541 agcgtgatatgttcaatcctgagttggtgcaatgcaaaatatccctgacatctttacgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 agcgtgatatgttcaatcctgagttggtgcaatgcaaaatatccctgacatctttacgct 44
Query: 601 tcttgtaaaatacgaaaagta 621
|||||||||||||||||||||
Sbjct: 43 tcttgtaaaatacgaaaagta 23
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6426
Number of Sequences: 1807
Number of extensions: 6426
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 1035
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1019
effective length of database: 10,329,639
effective search space: 10525902141
effective search space used: 10525902141
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)